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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004709.1_2543_3590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2543 - 3590

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAGAT

U12 Branch Point Sequence:

GGGTCAGACACC

Flanking Amino Acid:

LKTISLTVFKEFHKLELDSL

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

49.7

-0

1.1

46.3

37.5

Major PPT

83.1

0.74

0.9

77.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

-1.2

2.5

44.61

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019281

Chromosome:

PEDO01004709.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039240

541 - 4286

3746

ENSAPLT00000037675

541 - 4209

3669