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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004719.1_250_501_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

250 - 501

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGCCAT

5'SS Class:

weak_major

3'SS Sequence:

GCACGCACCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTAAAA

U12 Branch Point Sequence:

CAGAGGTTAAAA

Flanking Amino Acid:

GHGVFRGWSRHAHRAVSMSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.7

0.14

1.4

44.9

Major BPS

55.4

0.13

1.2

65.3

38.6

Major PPT

43.4

-0.3

1.6

35.9

35.1

Minor 5ss

-2.3

4.3

45.9

Minor BPS

39.8

-0.7

2.3

46.13

43.1

Associated Gene:

Gene:

MXD1

Ensembl Gene ID:

ENSAPLG00000018432

Chromosome:

PEDO01004719.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039992

86 - 2239

2154