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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004719.1_647_1806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

647 - 1806

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TCCACCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GTCTCTCCACCT

Flanking Amino Acid:

LLMRAKLHIKKLEDSDRKAL

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

71.4

40.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

75.7

0.58

0.8

31.3

Minor 5ss

29.1

-2.4

2.7

41.9

Minor BPS

45.1

-0.3

2.1

65.41

45.1

Associated Gene:

Gene:

MXD1

Ensembl Gene ID:

ENSAPLG00000018432

Chromosome:

PEDO01004719.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039992

86 - 2239

2154