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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004720.1_199_611_R

Intron Information:

Intron Rank:

143481

Intron Class:

major

Intron Phase:

Intron Coordinates:

199 - 611

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TCCTCTCCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

69.8

0.49

37.5

Major PPT

76.1

0.59

0.8

37.2

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

42.3

-0.5

2.1

59.92

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024520

Chromosome:

PEDO01004720.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018632

21 - 1699

1679