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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004733.1_234_941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

234 - 941

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTTCGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GACCCCTCACTT

Flanking Amino Acid:

HNEDNDSVRESLLTRCKVRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

85.7

0.8

80.4

31.5

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

46.8

-0.1

1.8

59.76

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029324

Chromosome:

PEDO01004733.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029026

21 - 2387

2367