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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004733.1_5555_6097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5555 - 6097

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTATCGATGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCGAT

U12 Branch Point Sequence:

TTTGCTCTATCG

Flanking Amino Acid:

VLLVTAIAFAVNAFQPRPQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

65.9

0.4

1.3

64.4

42.8

Major PPT

63.2

0.3

1.1

57.7

41.9

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

48.8

-0.2

2.1

63.58

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013811

Chromosome:

PEDO01004733.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014384

4218 - 8159

3942