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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004737.1_4613_4724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4613 - 4724

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

AGCGCGCTGACA

Flanking Amino Acid:

ELEETVKHTEVNGSQAKEEV

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

65.5

0.35

1.1

60.7

40.2

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

-0.7

2.3

49.89

41.2

Associated Gene:

Gene:

TRIM46

Ensembl Gene ID:

ENSAPLG00000009819

Chromosome:

PEDO01004737.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044237

637 - 6149

5513

ENSAPLT00000044116

637 - 6149

5513

ENSAPLT00000041052

637 - 6149

5513

ENSAPLT00000010256

637 - 6149

5513