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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004737.1_4821_4987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4821 - 4987

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

TGGTGGCTAACC

Flanking Amino Acid:

PVLSAYQALREKLTKSLAYI

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

85.7

0.8

0.7

80.4

24.9

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

43.2

-0.5

2.6

59.56

45.3

Associated Gene:

Gene:

TRIM46

Ensembl Gene ID:

ENSAPLG00000009819

Chromosome:

PEDO01004737.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044116

637 - 6149

5513

ENSAPLT00000041052

637 - 6149

5513

ENSAPLT00000010256

637 - 6149

5513

ENSAPLT00000044237

637 - 6149

5513