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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004737.1_5601_5705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5601 - 5705

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGGG

5'SS Class:

major

3'SS Sequence:

CGGCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CTGTGTGTGACG

Flanking Amino Acid:

PDRLDRLLKSGFGTYPGRKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

54.8

44.4

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

69.3

0.43

0.9

61.8

34.9

Minor 5ss

21.8

-3.3

3.4

28.2

Minor BPS

42.3

-0.7

2.4

49.14

45.6

Associated Gene:

Gene:

TRIM46

Ensembl Gene ID:

ENSAPLG00000009819

Chromosome:

PEDO01004737.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041052

637 - 6149

5513

ENSAPLT00000010256

637 - 6149

5513