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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004763.1_2220_2336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220 - 2336

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

TTCCCTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CTTCCCTTCCCT

Flanking Amino Acid:

RNSQTRIITVLGSVHHSQTD

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

45.5

Major BPS

-0.2

1.4

53.5

Major PPT

80.7

0.69

0.7

76.3

25.7

Minor 5ss

31.1

-2.2

2.9

42.2

44.3

Minor BPS

43.9

-0.3

3.6

77.02

45.4

Associated Gene:

Gene:

PAFAH2

Ensembl Gene ID:

ENSAPLG00000025024

Chromosome:

PEDO01004763.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031592

1417 - 4637

3221

ENSAPLT00000021550

1417 - 4637

3221