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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004763.1_2953_3413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2953 - 3413

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGG

5'SS Class:

major

3'SS Sequence:

ACTCTCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

AGGGGGTTAATT

Flanking Amino Acid:

QKEFYFRNMQVHQRANECVR

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

51.7

45.2

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

0.52

0.9

65.9

35.3

Minor 5ss

27.6

-2.6

3.6

38.4

46.6

Minor BPS

-0.4

2.4

58.27

45.3

Associated Gene:

Gene:

PAFAH2

Ensembl Gene ID:

ENSAPLG00000025024

Chromosome:

PEDO01004763.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031592

1417 - 4637

3221

ENSAPLT00000021550

1417 - 4637

3221