Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004765.1_5703_7207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5703 - 7207

Intron Length:

1505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAAGA

5'SS Class:

major

3'SS Sequence:

GTGCTTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAG

U12 Branch Point Sequence:

AAGCCCTGACCT

Flanking Amino Acid:

CNQFSVRVSESYAMPTKTNE

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

66.7

38.5

Major BPS

0.2

1.5

65.8

39.5

Major PPT

76.3

0.59

0.9

69.9

36.6

Minor 5ss

38.3

-1.3

2.9

49.3

46.5

Minor BPS

49.8

0.06

1.8

66.4

43.6

Associated Gene:

Gene:

MRPL48

Ensembl Gene ID:

ENSAPLG00000008046

Chromosome:

PEDO01004765.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008365

3090 - 8846

5757