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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004778.1_1585_2461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1585 - 2461

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

ACCCCGCTGACC

Flanking Amino Acid:

RLSRGLLLLWALLGRGLCHT

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

75.9

0.58

0.8

69.2

31.4

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

-0.6

2.2

50.11

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015253

Chromosome:

PEDO01004778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015890

815 - 4729

3915