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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004780.1_97_224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

97 - 224

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCAAC

5'SS Class:

major

3'SS Sequence:

TGCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

TGCCCCTCAGCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

70.2

35.9

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

71.5

0.48

0.8

65.3

30.5

Minor 5ss

34.4

-1.8

2.9

39.8

40.4

Minor BPS

-0.2

1.9

54.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026945

Chromosome:

PEDO01004780.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034133

21 - 1763

1743