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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004932.1_4284_5353_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4284 - 5353

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGCGCA

5'SS Class:

major

3'SS Sequence:

GACAAAAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TGCTTCAGAAGA

Flanking Amino Acid:

ARDVDTTTAGQFLNRKRGQD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

56.1

37.2

Major BPS

64.9

0.37

37.5

Major PPT

42.7

-0.4

1.1

28.6

33.2

Minor 5ss

33.4

-1.9

3.3

44.4

44.2

Minor BPS

45.4

-0.3

57.44

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025105

Chromosome:

PEDO01004932.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039772

3748 - 5657

1910