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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004940.1_955_1358_R

Intron Information:

Intron Rank:

135380

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

955 - 1358

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-CG

5'SS Sequence:

CCG|GTGCCGAGC

5'SS Class:

weak_major

3'SS Sequence:

GCAGCAGCCCCCG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGGCAC

U12 Branch Point Sequence:

GGGCCCGGCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

46.3

43.9

Major BPS

40.2

-0.6

1.3

40.4

Major PPT

32.9

-0.9

3.1

31.6

36.1

Minor 5ss

32.1

-2

3.3

42.4

44.9

Minor BPS

38.7

-0.9

2.3

46.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020248

Chromosome:

PEDO01004940.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030892

21 - 1791

1771