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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004964.1_414_489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

414 - 489

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCGCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

CGCCCCGTGACA

Flanking Amino Acid:

EAQTLQQYRVELAEKHQKTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

68.5

0.42

0.9

61.2

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

47.6

-0.2

2.1

56.43

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018820

Chromosome:

PEDO01004964.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022947

6 - 1173

1168