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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004989.1_715_814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

715 - 814

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGAAA

U12 Branch Point Sequence:

AGCCCCGAAACG

Flanking Amino Acid:

SPPPHPAQEEVRLHVALPRW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

44.2

-0.3

1.3

47.2

34.3

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

-0.6

2.3

47.74

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018393

Chromosome:

PEDO01004989.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046592

21 - 1552

1532