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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005006.1_2101_2521_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2101 - 2521

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGGGGT

5'SS Class:

major

3'SS Sequence:

AAATGTGCCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TCCGCCCCAAAT

Flanking Amino Acid:

KEEAERLQRQREEAEARARE

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

60.4

44.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

58.3

0.19

1.1

47.4

44.9

Minor 5ss

32.4

-2

3.5

47.3

48.1

Minor BPS

44.9

-0.3

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016464

Chromosome:

PEDO01005006.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022902

514 - 5716

5203