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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005006.1_2940_3021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2940 - 3021

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACG

5'SS Class:

strong_major

3'SS Sequence:

GTGCACCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CAGTTCTCACTC

Flanking Amino Acid:

PPRVPAEPPAAPPAPAAPSP

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

0.87

0.8

85.6

Major PPT

62.8

0.29

0.9

54.1

36.3

Minor 5ss

29.2

-2.4

2.8

33.6

41.8

Minor BPS

45.8

-0.3

1.8

50.66

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016464

Chromosome:

PEDO01005006.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022902

514 - 5716

5203