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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005006.1_3273_3368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3273 - 3368

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

TCTCTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCCCCCTCTATT

Flanking Amino Acid:

QPRLLPAGDSSPGPKNRPSS

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

45.9

-0.2

1.9

57.26

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016464

Chromosome:

PEDO01005006.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022902

514 - 5716

5203