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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005006.1_4060_5466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4060 - 5466

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TCTCCCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TCTCCCTTCTCA

Flanking Amino Acid:

SATLWNSPSRNRSLQLSPWE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

33.2

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

82.1

0.72

0.7

80.1

25.1

Minor 5ss

33.4

-1.9

3.4

43.5

37.7

Minor BPS

43.3

-0.5

3.6

68.52

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016464

Chromosome:

PEDO01005006.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022902

514 - 5716

5203