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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005027.1_1332_1710_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1332 - 1710

Intron Length:
379

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
CCTCCCACCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAC

U12 Branch Point Sequence:
TGGGCTCTGACG

Flanking Amino Acid:
APWGGSRHATWKCFLYCNGL

Intron Amino Acid Position:
241

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
67.9
37.3

Major BPS
69.1
0.47
1
60.7
37.6

Major PPT
68
0.4
0.8
58.3
31.5

Minor 5ss
33.5
-1.9
2.7
39.1
38.9

Minor BPS
46.7
-0.4
1.8
51.55
43.3

Associated Gene:

Gene:
SLC25A39

Ensembl Gene ID:

Chromosome:
PEDO01005027.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 3521
3501