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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005027.1_5232_5354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5232 - 5354

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCCCG

5'SS Class:

major

3'SS Sequence:

CGTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGGGGCTGAGCG

Flanking Amino Acid:

ESGSDGKLYRRHSFVSTDQL

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

57.2

47.5

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

71.7

0.49

0.8

65.2

30.5

Minor 5ss

43.7

-0.7

2.9

57.5

46.7

Minor BPS

38.6

-1

37.67

44.4

Associated Gene:

Gene:

RUNDC3A

Ensembl Gene ID:

ENSAPLG00000024431

Chromosome:

PEDO01005027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047514

4769 - 8551

3783

ENSAPLT00000033816

4127 - 8624

4498