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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005027.1_5493_6884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5493 - 6884

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

GCGTGTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GTGCGCTGAGCG

Flanking Amino Acid:

EGVILELQEQLTGLIPCENT

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

39.9

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

61.1

0.25

53.5

41.5

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

42.2

-0.7

2.1

46.77

45.5

Associated Gene:

Gene:

RUNDC3A

Ensembl Gene ID:

ENSAPLG00000024431

Chromosome:

PEDO01005027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048306

4719 - 8624

3906

ENSAPLT00000033816

4127 - 8624

4498