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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005027.1_8403_8492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8403 - 8492

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAC

U12 Branch Point Sequence:

CTCCACCTACCC

Flanking Amino Acid:

STALRDTRTTRRFYDDGAIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

54.6

0.11

1.2

64.4

33.8

Major PPT

68.8

0.42

0.9

62.1

34.8

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

-0.5

53.52

43.9

Associated Gene:

Gene:

RUNDC3A

Ensembl Gene ID:

ENSAPLG00000024431

Chromosome:

PEDO01005027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048306

4719 - 8624

3906

ENSAPLT00000047514

4769 - 8551

3783

ENSAPLT00000033816

4127 - 8624

4498