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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005037.1_370_1605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

370 - 1605

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

ACCAACTCAATA

Flanking Amino Acid:

GEWLREHGGWDGFCRFFGRH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

75.5

0.63

66.3

40.4

Major PPT

80.6

0.69

0.8

73.1

37.3

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

46.5

-0.2

1.7

51.68

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021997

Chromosome:

PEDO01005037.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017887

21 - 1743

1723