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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005079.1_3973_4125_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3973 - 4125

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATTCCCT

5'SS Class:

weak_major

3'SS Sequence:

TGCACACGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

GCTTTCTCAATG

Flanking Amino Acid:

VCLFVFLMSADTFSLPFCHG

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.1

45.4

42.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

51.6

0.04

1.1

43.2

42.4

Minor 5ss

47.9

-0.2

2.7

62.7

42.6

Minor BPS

57.7

0.1

1.6

59.72

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019421

Chromosome:

PEDO01005079.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022413

3482 - 4156

675