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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005117.1_8277_8504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8277 - 8504

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GCGACTTTAACA

Flanking Amino Acid:

PKVLNPRGLRYPLPAPQGGK

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.4

40.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

79.1

0.66

0.9

76.4

32.2

Minor 5ss

30.2

-2.3

2.5

26.6

35.9

Minor BPS

64.4

0.45

1.4

64.51

Associated Gene:

Gene:

NOB1

Ensembl Gene ID:

ENSAPLG00000021330

Chromosome:

PEDO01005117.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019843

7697 - 9817

2121