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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005117.1_8889_9108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8889 - 9108

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCCCCTGACGG

Flanking Amino Acid:

GCVTTDFAMQNVLLQMGLHV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

82.1

0.72

0.7

76.3

25.7

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

40.3

-0.8

1.9

37.98

44.5

Associated Gene:

Gene:

NOB1

Ensembl Gene ID:

ENSAPLG00000021330

Chromosome:

PEDO01005117.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019843

7697 - 9817

2121