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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005139.1_1945_2178_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1945 - 2178

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGCGCGCC

5'SS Class:

weak_major

3'SS Sequence:

GCCGTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GCCCGCTGAGCC

Flanking Amino Acid:

TDICFENAVLFTEAGPDFEL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.5

0.11

1.1

36.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

60.8

0.24

0.9

49.8

39.4

Minor 5ss

33.7

-1.9

3.6

47.3

42.9

Minor BPS

41.2

-0.6

45.35

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024241

Chromosome:

PEDO01005139.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023011

743 - 3809

3067