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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005150.1_172_276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172 - 276

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CTTCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGGAT

U12 Branch Point Sequence:

TCTTCCTCCCCC

Flanking Amino Acid:

DRGFRFISEQVCHHPPISAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

44.5

-0.3

1.4

38.4

41.7

Major PPT

77.6

0.62

0.7

69.4

31.3

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

40.5

-0.7

3.6

66.23

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026088

Chromosome:

PEDO01005150.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041077

52 - 1957

1906

ENSAPLT00000023517

67 - 1957

1891