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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005157.1_23156_23903_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

23156 - 23903

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGATAATA

5'SS Class:

major

3'SS Sequence:

TAAAGCTGCACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TAATTATGAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

72.5

31.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

57.4

0.17

1.1

49.7

43.3

Minor 5ss

33.4

-1.9

40.8

39.3

Minor BPS

49.5

0.04

1.8

69.83

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015422

Chromosome:

PEDO01005157.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022396

23140 - 35780

12641