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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005174.1_1170_1501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1170 - 1501

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CCCCCCCCATGT

Flanking Amino Acid:

GARPRGGGGQVEVARKHIAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

48.9

-0

1.3

39.1

Major PPT

80.6

0.69

0.7

72.9

31.9

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

35.7

-1

2.1

45.76

45.5

Associated Gene:

Gene:

AS3MT

Ensembl Gene ID:

ENSAPLG00000029915

Chromosome:

PEDO01005174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046402

822 - 3855

3034