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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005182.1_3877_3979_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3877 - 3979

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCGGGGTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TCGTCCCAAATC

Flanking Amino Acid:

LSCIMYTIFQERELVKTFKI

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

0.16

53.1

41.5

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

49.5

-0

62.41

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017836

Chromosome:

PEDO01005182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035947

833 - 5064

4232