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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005188.1_6845_7025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6845 - 7025

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGGGCC

5'SS Class:

major

3'SS Sequence:

TTCTCCCGTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTTTCCCCAATT

Flanking Amino Acid:

DPRRFHCLGMGGSDASQIQN

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

37.3

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

65.8

0.36

1.1

64.2

Minor 5ss

28.7

-2.4

3.7

32.9

42.5

Minor BPS

66.8

0.61

1.9

89.35

Associated Gene:

Gene:

GSX2

Ensembl Gene ID:

ENSAPLG00000031196

Chromosome:

PEDO01005188.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022659

6167 - 7714

1548