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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005209.1_1346_3520_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1346 - 3520

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCACCTTAA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

LVPGGQWATNVKPQFESREN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.4

55.2

40.6

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

36.1

-1.6

4.1

52.2

45.3

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006625

Chromosome:

PEDO01005209.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006866

1316 - 4531

3216