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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005272.1_3029_3550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3029 - 3550

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TATTGCTGAAGC

Flanking Amino Acid:

SSCYELLTIIGRGFEDLMVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

89.8

0.89

0.6

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

50.8

0.01

2.2

68.47

42.8

Associated Gene:

Gene:

STRADA

Ensembl Gene ID:

ENSAPLG00000012010

Chromosome:

PEDO01005272.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012537

2866 - 4919

2054

ENSAPLT00000048357

863 - 4919

4057