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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005272.1_3673_3807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3673 - 3807

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGGA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

CTNEMVTFLQGELHVSKLFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.1

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.5

0.89

0.7

88.9

28.2

Minor 5ss

35.3

-1.7

3.4

47.8

47.6

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

STRADA

Ensembl Gene ID:

ENSAPLG00000012010

Chromosome:

PEDO01005272.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012537

2866 - 4919

2054

ENSAPLT00000048357

863 - 4919

4057