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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005290.1_12281_12389_F

Intron Information:

Intron Rank:

144696

Intron Class:

major

Intron Phase:

Intron Coordinates:

12281 - 12389

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCATCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTTCCCTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

80.3

32.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

80.1

0.68

0.8

77.9

29.6

Minor 5ss

44.1

-0.6

3.3

66.4

45.1

Minor BPS

64.1

0.52

2.1

88.6

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027974

Chromosome:

PEDO01005290.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020059

11845 - 13401

1557