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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005301.1_4559_6842_R

Intron Information:

Intron Rank:

141198

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4559 - 6842

Intron Length:

2284

Sequence Information:

Terminal Dinucleotides:

GC-GC

5'SS Sequence:

AAT|GCAGATATA

5'SS Class:

major

3'SS Sequence:

GGGCCACTCGAGC|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAAAA

U12 Branch Point Sequence:

CCGTCCAAAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.36

1.3

72.3

36.6

Major BPS

55.5

0.14

61.5

32.5

Major PPT

13.9

-2

3.9

30.1

Minor 5ss

29.4

-2.4

4.2

45.2

43.4

Minor BPS

43.1

-0.5

2.2

50.24

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023310

Chromosome:

PEDO01005301.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032088

3801 - 8325

4525