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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005342.1_1429_1543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1429 - 1543

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGGC

5'SS Class:

major

3'SS Sequence:

GCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CCCGGCTGAGCT

Flanking Amino Acid:

RAGAGGFPKQEPLEAFSGCQ

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

56.6

42.5

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

64.2

0.32

0.8

53.7

Minor 5ss

-1.8

3.8

50.3

46.3

Minor BPS

40.8

-0.6

2.1

51.75

48.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019959

Chromosome:

PEDO01005342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017481

21 - 2633

2613