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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005343.1_133_191_F

Intron Information:

Intron Rank:

149333

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133 - 191

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

ATG|GTGGTGGCA

5'SS Class:

weak_major

3'SS Sequence:

TGTCCCCATGGTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTGTCCCCATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.1

48.3

35.9

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

32.8

-0.9

3.3

51.3

38.3

Minor 5ss

22.9

-3.1

3.4

26.5

Minor BPS

41.5

-0.5

2.3

60.54

48.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030343

Chromosome:

PEDO01005343.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023060

21 - 1681

1661