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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005357.1_3433_3547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3433 - 3547

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

QGVHSLGLQRNRIETIENLD

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

25.2

-2.9

3.1

24.5

37.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026278

Chromosome:

PEDO01005357.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019258

661 - 4552

3892