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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005357.1_3855_4619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3855 - 4619

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

GTGCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

CAGCCCCCAGCC

Flanking Amino Acid:

RSAEGPRGGRDNGYARLLRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

69.1

0.43

0.9

62.3

34.7

Minor 5ss

25.8

-2.8

3.1

25.9

36.5

Minor BPS

40.6

-0.7

46.44

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021952

Chromosome:

PEDO01005357.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040159

2847 - 6468

3622