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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005387.1_4134_4915_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4134 - 4915

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGTGCAG

5'SS Class:

major

3'SS Sequence:

GCCCATGCATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTACAA

U12 Branch Point Sequence:

TGCCCATGCATG

Flanking Amino Acid:

VYLFRKQGKLSKKILAMAAL

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.8

0.26

1.3

44.9

42.9

Major BPS

52.2

0.06

34.9

Major PPT

44.5

-0.3

1.7

46.8

40.1

Minor 5ss

18.6

-3.6

25.4

39.5

Minor BPS

-0.9

43.72

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024913

Chromosome:

PEDO01005387.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014167

2764 - 6622

3859