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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005388.1_17606_19523_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17606 - 19523

Intron Length:

1918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGTTGGGC

5'SS Class:

weak_major

3'SS Sequence:

GCTGCTGCACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

CTGTGCAAAACC

Flanking Amino Acid:

EVRVLLAPLRGPLDGGLQ*

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.1

44.1

37.6

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

45.3

-0.2

1.7

43.5

42.3

Minor 5ss

30.8

-2.2

3.5

40.6

Minor BPS

44.7

-0.4

2.3

58.58

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027677

Chromosome:

PEDO01005388.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040193

9830 - 19549

9720