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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005400.1_1417_1966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1417 - 1966

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTGCCTGATAT

Flanking Amino Acid:

WSVIIFTKTCKECQILNMML

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.3

34.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.9

0.69

80.1

32.3

Minor 5ss

28.3

-2.5

3.1

31.3

36.7

Minor BPS

53.8

0.2

1.9

78.31

43.5

Associated Gene:

Gene:

DDX49

Ensembl Gene ID:

ENSAPLG00000008420

Chromosome:

PEDO01005400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008783

274 - 2909

2636