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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005400.1_2043_2161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2043 - 2161

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GCCTCCCTAACC

Flanking Amino Acid:

SVALHSMMKQRQRFAALAKF

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

85.6

0.8

0.7

80.2

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

62.2

0.36

1.8

67.98

43.5

Associated Gene:

Gene:

DDX49

Ensembl Gene ID:

ENSAPLG00000008420

Chromosome:

PEDO01005400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008783

274 - 2909

2636