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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_25943_26494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25943 - 26494

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TAATCCTGATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

78.8

0.71

67.6

40.6

Major PPT

85.9

0.81

0.8

80.6

31.5

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

58.9

0.36

1.7

75.36

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549